GRMZM2G395844

Description : ADP-ribosylation factor A1B

Gene families : OG_42_0000220 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G395844
Cluster	HCCA clusters: Cluster_118

Target	Alias	Description	ECC score	Gene Family Method
Cre12.g486250	No alias	ADP-ribosylation factor A1F	0.01	Orthogroups_2024-Update
GRMZM2G113995	No alias	ADP-ribosylation factor B1B	0.03	Orthogroups_2024-Update
LOC_Os01g59790	No alias	ADP-ribosylation factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os07g12170	No alias	ADP-ribosylation factor, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00027856-RA	No alias	(p49076\|arf_maize : 218.0) ADP-ribosylation factor - Zea...	0.02	Orthogroups_2024-Update
Pp1s3_102V6	No alias	adp-ribosylation factor	0.02	Orthogroups_2024-Update
Sobic.010G088100.1	No alias	ARF-GTPase *(ARFA)	0.02	Orthogroups_2024-Update
Sopen01g044370	No alias	ADP-ribosylation factor family	0.02	Orthogroups_2024-Update
evm.model.tig00001093.2	No alias	(at2g24765 : 241.0) GTPase required for Golgi targeting...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Predicted GO
MF	GO:0016211	ammonia ligase activity	IEP	Predicted GO
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	Predicted GO
CC	GO:0016471	vacuolar proton-transporting V-type ATPase complex	IEP	Predicted GO
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Predicted GO
CC	GO:0019867	outer membrane	IEP	Predicted GO
MF	GO:0022804	active transmembrane transporter activity	IEP	Predicted GO
CC	GO:0033176	proton-transporting V-type ATPase complex	IEP	Predicted GO
CC	GO:0044437	vacuolar part	IEP	Predicted GO
MF	GO:0071949	FAD binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	57	229

External Links

No external refs found!