GRMZM2G398506

Description : WRKY family transcription factor family protein

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G398506
Cluster	HCCA clusters: Cluster_213

Target	Alias	Description	ECC score	Gene Family Method
92733	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
AC193630.3_FG004	No alias	Function unknown	0.03	Orthogroups_2024-Update
At2g03340	No alias	Putative WRKY DNA-binding protein...	0.03	Orthogroups_2024-Update
Bradi4g33370	No alias	WRKY DNA-binding protein 2	0.05	Orthogroups_2024-Update
Brara.B02887.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Cre04.g228400	No alias	WRKY DNA-binding protein 26	0.02	Orthogroups_2024-Update
Glyma.02G297400	No alias	WRKY family transcription factor family protein	0.02	Orthogroups_2024-Update
Glyma.09G250500	No alias	WRKY DNA-binding protein 2	0.03	Orthogroups_2024-Update
Glyma.13G267600	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
LOC_Os01g51690	No alias	WRKY26, expressed	0.02	Orthogroups_2024-Update
MA_16118g0010	No alias	(at5g56270 : 324.0) WRKY transcription factor 2; WRKY...	0.03	Orthogroups_2024-Update
PSME_00001545-RA	No alias	(at1g29860 : 137.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00004738-RA	No alias	(at1g13960 : 268.0) Encodes WRKY DNA-binding protein 4...	0.03	Orthogroups_2024-Update
PSME_00049648-RA	No alias	(at1g62300 : 176.0) Encodes a transcription factor...	0.04	Orthogroups_2024-Update
Potri.005G203200	No alias	WRKY DNA-binding protein 28	0.04	Orthogroups_2024-Update
Pp1s426_30V6	No alias	wrky transcription factor 6	0.02	Orthogroups_2024-Update
Seita.5G032600.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.5G307700.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G040800.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.005G013600.2	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEP	Predicted GO
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Predicted GO
MF	GO:0004427	inorganic diphosphatase activity	IEP	Predicted GO
BP	GO:0006401	RNA catabolic process	IEP	Predicted GO
BP	GO:0006402	mRNA catabolic process	IEP	Predicted GO
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	Predicted GO
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
MF	GO:0008171	O-methyltransferase activity	IEP	Predicted GO
MF	GO:0009678	hydrogen-translocating pyrophosphatase activity	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
BP	GO:0022406	membrane docking	IEP	Predicted GO
BP	GO:0048278	vesicle docking	IEP	Predicted GO
BP	GO:0051640	organelle localization	IEP	Predicted GO
BP	GO:0140029	exocytic process	IEP	Predicted GO
BP	GO:0140056	organelle localization by membrane tethering	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	230	286
IPR003657	WRKY_dom	404	461

External Links

No external refs found!

GRMZM2G398506

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation