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  5. GRMZM2G399212

GRMZM2G399212


Description : RNA helicase family protein


Gene families : OG_42_0000651 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000651_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G399212
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
At1g48650 No alias DEA(D/H)-box RNA helicase family protein... 0.02 Orthogroups_2024-Update
At2g01130 No alias DExH-box ATP-dependent RNA helicase DExH5, mitochondrial... 0.04 Orthogroups_2024-Update
Glyma.05G242800 No alias DEA(D/H)-box RNA helicase family protein 0.04 Orthogroups_2024-Update
LOC_Os03g53760 No alias ATP-dependent RNA helicase DHX36, putative, expressed 0.03 Orthogroups_2024-Update
MA_97917g0010 No alias (at5g04895 : 280.0) DEA(D/H)-box RNA helicase family... 0.03 Orthogroups_2024-Update
Mp5g09990.1 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.03 Orthogroups_2024-Update
Pp1s357_45V6 No alias deah (asp-glu-ala-asp his) box polypeptide 57 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 646 774
IPR011709 DUF1605 997 1077
IPR007502 Helicase-assoc_dom 838 919
No external refs found!