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  5. GRMZM2G399877

GRMZM2G399877


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0010063 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G399877
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Seita.7G082100.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 345 372
IPR002885 Pentatricopeptide_repeat 151 177
IPR002885 Pentatricopeptide_repeat 122 145
IPR002885 Pentatricopeptide_repeat 410 437
IPR002885 Pentatricopeptide_repeat 283 313
IPR002885 Pentatricopeptide_repeat 254 281
IPR002885 Pentatricopeptide_repeat 180 227
No external refs found!