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  5. GRMZM2G400268

GRMZM2G400268


Description : RING/U-box superfamily protein


Gene families : OG_42_0000548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G400268
Cluster HCCA clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Bradi2g50940 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.H01492.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.03 Orthogroups_2024-Update
HORVU4Hr1G003600.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.03 Orthogroups_2024-Update
HORVU5Hr1G011730.2 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.04 Orthogroups_2024-Update
Potri.007G031600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Seita.7G053100.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.02 Orthogroups_2024-Update
Seita.7G177900.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.03 Orthogroups_2024-Update
Solyc02g065540 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061DGI8_THECC) 0.02 Orthogroups_2024-Update
Solyc02g078320 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT1G19310.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!