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  5. GRMZM2G405622

GRMZM2G405622


Description : expansin B2


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G405622
Cluster HCCA clusters: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
Brara.K00035.1 No alias beta-class expansin 0.04 Orthogroups_2024-Update
PSME_00010585-RA No alias (at2g20750 : 194.0) member of BETA-EXPANSINS. Naming... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predicted GO
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005740 mitochondrial envelope IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0030490 maturation of SSU-rRNA IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030686 90S preribosome IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
CC GO:0031967 organelle envelope IEP Predicted GO
CC GO:0031975 envelope IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 177 257
IPR009009 RlpA-like_DPBB 83 164
No external refs found!