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  5. GRMZM2G408096

GRMZM2G408096


Description : nucleic acid binding;zinc ion binding;DNA binding


Gene families : OG_42_0000694 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G408096
Cluster HCCA clusters: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Bradi2g57107 No alias nucleic acid binding;zinc ion binding;DNA binding 0.02 Orthogroups_2024-Update
Bradi3g30620 No alias nucleic acid binding;zinc ion binding;DNA binding 0.06 Orthogroups_2024-Update
Bradi4g35977 No alias nucleic acid binding;zinc ion binding;DNA binding 0.04 Orthogroups_2024-Update
Glyma.04G008500 No alias nucleic acid binding;zinc ion binding;DNA binding 0.05 Orthogroups_2024-Update
Glyma.06G008300 No alias nucleic acid binding;zinc ion binding;DNA binding 0.05 Orthogroups_2024-Update
Mp4g08690.1 No alias protein factor (NERD) of non-canonical RdDM pathway 0.02 Orthogroups_2024-Update
PSME_00043297-RA No alias (at2g16485 : 148.0) nucleic acid binding;zinc ion... 0.03 Orthogroups_2024-Update
Seita.5G315200.1 No alias protein factor (NERD) of non-canonical RdDM pathway 0.04 Orthogroups_2024-Update
Sobic.001G196500.2 No alias protein factor (NERD) of non-canonical RdDM pathway 0.03 Orthogroups_2024-Update
Sobic.003G293200.1 No alias protein factor (NERD) of non-canonical RdDM pathway 0.05 Orthogroups_2024-Update
Sopen11g024210 No alias Plus-3 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
CC GO:0000781 chromosome, telomeric region IEP Predicted GO
CC GO:0000784 nuclear chromosome, telomeric region IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
InterPro domains Description Start Stop
IPR004343 Plus-3_dom 400 507
IPR003169 GYF 827 866
IPR003121 SWIB_MDM2_domain 273 346
No external refs found!