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  5. GRMZM2G409372

GRMZM2G409372


Description : RING/U-box superfamily protein


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G409372
Cluster HCCA clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
172324 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
405202 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
A4A49_21361 No alias ring-h2 finger protein atl78 0.04 Orthogroups_2024-Update
A4A49_29196 No alias ring-h2 finger protein atl72 0.03 Orthogroups_2024-Update
A4A49_36505 No alias e3 ubiquitin-protein ligase atl6 0.03 Orthogroups_2024-Update
A4A49_61979 No alias ring-h2 finger protein atl78 0.02 Orthogroups_2024-Update
At1g72200 No alias RING-H2 finger protein ATL11... 0.03 Orthogroups_2024-Update
At2g42350 No alias RING-H2 finger protein ATL40... 0.03 Orthogroups_2024-Update
At2g42360 No alias E3 ubiquitin-protein ligase ATL41... 0.02 Orthogroups_2024-Update
At4g09130 No alias Putative RING-H2 finger protein ATL37... 0.03 Orthogroups_2024-Update
At4g40070 No alias RING-H2 finger protein ATL32... 0.03 Orthogroups_2024-Update
At5g17600 No alias RING-H2 finger protein ATL52... 0.04 Orthogroups_2024-Update
At5g47610 No alias At5g47610 [Source:UniProtKB/TrEMBL;Acc:Q1H5E6] 0.03 Orthogroups_2024-Update
Bradi2g49152 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g05840 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g32215 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g44733 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g44454 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 Orthogroups_2024-Update
Bradi5g19960 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.A02910.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.A03736.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.B00007.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.B03540.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.C03025.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.F02864.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.G02364.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.H00318.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.I03307.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.J02316.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
GRMZM2G386584 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G460958 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G140700 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G172300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G242800 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Glyma.14G177900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.17G028400 No alias TOXICOS EN LEVADURA 2 0.02 Orthogroups_2024-Update
Glyma.18G239400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G003000.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G080020.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os01g11520 No alias RING-H2 finger protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os02g08200 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g15100 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g35144 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g52210 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g37740 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g34870 No alias Zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_12363g0010 No alias (at1g72310 : 126.0) Encodes a putative RING-H2 zinc... 0.02 Orthogroups_2024-Update
MA_227897g0010 No alias (at3g16720 : 112.0) RING-H2 protein induced after... 0.03 Orthogroups_2024-Update
MA_6697g0010 No alias (at1g72310 : 120.0) Encodes a putative RING-H2 zinc... 0.02 Orthogroups_2024-Update
MA_80729g0030 No alias (at3g16720 : 139.0) RING-H2 protein induced after... 0.04 Orthogroups_2024-Update
MA_81046g0010 No alias (at1g49230 : 127.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_9143538g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_94359g0010 No alias (at4g35480 : 121.0) Encodes a putative RING-H2 finger... 0.03 Orthogroups_2024-Update
PSME_00003015-RA No alias (at3g05200 : 122.0) Encodes a putative RING-H2 zinc... 0.03 Orthogroups_2024-Update
PSME_00003016-RA No alias (at1g72200 : 114.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00003023-RA No alias (at1g72200 : 141.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00022170-RA No alias (at1g53820 : 134.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00051307-RA No alias (at3g18773 : 100.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00054098-RA No alias (at3g16720 : 124.0) RING-H2 protein induced after... 0.03 Orthogroups_2024-Update
PSME_00054622-RA No alias (at1g49230 : 106.0) RING/U-box superfamily protein;... 0.01 Orthogroups_2024-Update
PSME_00057213-RA No alias (at1g72310 : 115.0) Encodes a putative RING-H2 zinc... 0.02 Orthogroups_2024-Update
Potri.002G006400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.004G209600 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.005G036800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G244800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G144200 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.007G057300 No alias RING-H2 finger A3A 0.03 Orthogroups_2024-Update
Potri.007G111900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.011G063100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.013G073500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G049300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G186600.1 No alias regulatory ubiquitin-protein ligase *(PRU2) 0.01 Orthogroups_2024-Update
Seita.1G203900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.4G088200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.004G283400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.005G012100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G036400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G100200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G152100.2 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.009G056600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.010G157300.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc01g088440 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc01g105610 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc01g105620 No alias RING/U-box superfamily protein, putative (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Solyc03g032060 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G20823.1) 0.04 Orthogroups_2024-Update
Solyc05g055140 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) 0.02 Orthogroups_2024-Update
Solyc08g076830 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc09g075320 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT4G15975.1) 0.03 Orthogroups_2024-Update
Solyc11g005320 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) 0.03 Orthogroups_2024-Update
Solyc11g066510 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G27940.1) 0.02 Orthogroups_2024-Update
Solyc11g073170 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.03 Orthogroups_2024-Update
Sopen01g051390 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen02g017550 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen06g017190 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen11g001290 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen11g001310 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen11g002340 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0004019 adenylosuccinate synthase activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
CC GO:0005747 mitochondrial respiratory chain complex I IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0030964 NADH dehydrogenase complex IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031226 intrinsic component of plasma membrane IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0045271 respiratory chain complex I IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
CC GO:0046658 anchored component of plasma membrane IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 125 169
No external refs found!