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  5. Solyc03g034220

Solyc03g034220


Description : Tomato RuBP carboxylase small subunit


Gene families : OG_42_0000599 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc03g034220
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Cre02.g120100 No alias ribulose bisphosphate carboxylase small chain 1A 0.02 Orthogroups_2024-Update
Glyma.13G097100 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G033540.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Orthogroups_2024-Update
HORVU5Hr1G038630.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Orthogroups_2024-Update
HORVU5Hr1G050990.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Orthogroups_2024-Update
Mp4g15080.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Orthogroups_2024-Update
Pp1s46_42V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.05 Orthogroups_2024-Update
Pp1s545_4V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.03 Orthogroups_2024-Update
Seita.3G269500.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Orthogroups_2024-Update
Seita.3G269600.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Orthogroups_2024-Update
Seita.3G312200.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
CC GO:0009512 cytochrome b6f complex IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR024680 RuBisCO_ssu_N 2 44
IPR000894 RuBisCO_sc_dom 69 177
No external refs found!