1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. GRMZM2G411764

GRMZM2G411764


Description : Ribosomal protein L39 family protein


Gene families : OG_42_0002686 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002686_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G411764
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Bradi1g47501 No alias Ribosomal protein L39 family protein 0.02 Orthogroups_2024-Update
LOC_Os02g55370 No alias 60S ribosomal protein L39, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os06g08320 No alias 60S ribosomal protein L39, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00038050-RA No alias (p51426|rl39_orysa : 108.0) 60S ribosomal protein L39 -... 0.06 Orthogroups_2024-Update
Potri.018G022100 No alias Ribosomal protein L39 family protein 0.03 Orthogroups_2024-Update
Potri.018G112301 No alias Ribosomal protein L39 family protein 0.03 Orthogroups_2024-Update
Pp1s104_75V6 No alias 60s ribosomal protein l39 0.07 Orthogroups_2024-Update
Pp1s89_150V6 No alias 60S ribosomal protein L39... 0.09 Orthogroups_2024-Update
Seita.1G351900.1 No alias component *(eL39) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Solyc12g010350 No alias 60S ribosomal protein L39 (AHRD V3.3 *** RL39_MAIZE) 0.09 Orthogroups_2024-Update
Sopen07g001180 No alias Ribosomal L39 protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0010011 auxin binding IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0042562 hormone binding IEP Predicted GO
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000077 Ribosomal_L39 9 49
No external refs found!