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  5. GRMZM2G414540

GRMZM2G414540


Description : syntaxin of plants 121


Gene families : OG_42_0000336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G414540
Cluster HCCA clusters: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
443146 No alias syntaxin of plants 131 0.03 Orthogroups_2024-Update
74098 No alias syntaxin of plants 124 0.02 Orthogroups_2024-Update
A4A49_24964 No alias syntaxin-121 0.03 Orthogroups_2024-Update
Bradi1g56720 No alias syntaxin of plants 131 0.03 Orthogroups_2024-Update
Bradi3g07970 No alias syntaxin of plants 124 0.03 Orthogroups_2024-Update
HORVU6Hr1G038490.2 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.02 Orthogroups_2024-Update
LOC_Os06g07200 No alias syntaxin, putative, expressed 0.03 Orthogroups_2024-Update
Potri.004G035400 No alias syntaxin of plants 124 0.02 Orthogroups_2024-Update
Potri.006G202200 No alias syntaxin of plants 121 0.02 Orthogroups_2024-Update
Potri.016G068600 No alias syntaxin of plants 121 0.04 Orthogroups_2024-Update
Seita.9G063400.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.05 Orthogroups_2024-Update
Sobic.001G064900.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.05 Orthogroups_2024-Update
Solyc01g006950 No alias Syntaxin, putative (AHRD V3.3 *** B9SDJ9_RICCO) 0.05 Orthogroups_2024-Update
Sopen10g032370 No alias SNARE domain 0.02 Orthogroups_2024-Update
evm.model.contig_2095.12 No alias (at5g08080 : 84.7) member of SYP13 Gene Family; syntaxin... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 243 295
IPR006011 Syntaxin_N 35 242
No external refs found!