GRMZM2G414805

Description : squamosa promoter binding protein-like 10

Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G414805
Cluster	HCCA clusters: Cluster_138

Target	Alias	Description	ECC score	Gene Family Method
Brara.H02059.1	No alias	SBP-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I03020.1	No alias	SBP-type transcription factor	0.04	Orthogroups_2024-Update
GRMZM2G065451	No alias	squamosa promoter binding protein-like 2	0.03	Orthogroups_2024-Update
Glyma.01G075800	No alias	squamosa promoter binding protein-like 10	0.03	Orthogroups_2024-Update
Glyma.04G159600	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.03	Orthogroups_2024-Update
Pp1s23_77V6	No alias	squamosa promoter-binding	0.02	Orthogroups_2024-Update
Pp1s34_37V6	No alias	squamosa promoter-binding	0.02	Orthogroups_2024-Update
Seita.1G091900.1	No alias	SBP-type transcription factor	0.03	Orthogroups_2024-Update
Solyc10g018780	No alias	Squamosa promoter binding protein 8a	0.02	Orthogroups_2024-Update
Solyc12g038520	No alias	Squamosa promoter binding protein 6c	0.03	Orthogroups_2024-Update
Sopen02g022770	No alias	SBP domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
MF	GO:0019825	oxygen binding	IEP	Predicted GO
BP	GO:0035556	intracellular signal transduction	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	160	233

External Links

No external refs found!