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  5. GRMZM2G415215

GRMZM2G415215


Description : Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain


Gene families : OG_42_0002631 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G415215
Cluster HCCA clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Bradi1g12490 No alias Golgi-body localisation protein domain ;RNA pol II... 0.04 Orthogroups_2024-Update
Cre14.g608050 No alias Golgi-body localisation protein domain ;RNA pol II... 0.02 Orthogroups_2024-Update
Kfl00018_0580 kfl00018_0580_v1.1 (at1g58250 : 584.0) SABRE, putative gene of unknown... 0.03 Orthogroups_2024-Update
PSME_00008374-RA No alias (at1g58250 : 172.0) SABRE, putative gene of unknown... 0.03 Orthogroups_2024-Update
Seita.9G139500.1 No alias stabilizing factor of microtubule orientation *(SAB/KIP) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004832 valine-tRNA ligase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006438 valyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR019443 FMP27_C 1877 1940
No external refs found!