GRMZM2G416201

Description : rna processing factor 2

Gene families : OG_42_0000929 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G416201
Cluster	HCCA clusters: Cluster_90

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g14190	No alias	Pentatricopeptide repeat (PPR) superfamily protein	0.05	Orthogroups_2024-Update
LOC_Os10g35650	No alias	expressed protein	0.04	Orthogroups_2024-Update
Seita.7G058000.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Seita.7G058100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.8G158000.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.8G161400.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.002G054200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.005G026500.2	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.005G027600.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.005G030850.1	No alias	Unknown function	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0005516	calmodulin binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	694	724
IPR002885	Pentatricopeptide_repeat	486	513
IPR002885	Pentatricopeptide_repeat	345	374
IPR002885	Pentatricopeptide_repeat	380	409
IPR002885	Pentatricopeptide_repeat	590	618
IPR002885	Pentatricopeptide_repeat	625	670
IPR002885	Pentatricopeptide_repeat	275	320
IPR002885	Pentatricopeptide_repeat	516	563
IPR002885	Pentatricopeptide_repeat	130	176
IPR002885	Pentatricopeptide_repeat	411	460
IPR002885	Pentatricopeptide_repeat	201	250

External Links

No external refs found!