Description : Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FXC1]
Gene families : OG_42_0002108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002108_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Arabidopsis release: At1g56710 | |
Cluster | HCCA clusters: Cluster_135 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Sopen04g003350 | No alias | Glycosyl hydrolases family 28 | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | IEA | InterProScan predictions |
BP | GO:0005975 | carbohydrate metabolic process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | Predicted GO |
CC | GO:0005576 | extracellular region | IEP | Predicted GO |
BP | GO:0007264 | small GTPase mediated signal transduction | IEP | Predicted GO |
MF | GO:0008200 | ion channel inhibitor activity | IEP | Predicted GO |
MF | GO:0016247 | channel regulator activity | IEP | Predicted GO |
MF | GO:0016248 | channel inhibitor activity | IEP | Predicted GO |
MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Predicted GO |
MF | GO:0016843 | amine-lyase activity | IEP | Predicted GO |
MF | GO:0016844 | strictosidine synthase activity | IEP | Predicted GO |
MF | GO:0030695 | GTPase regulator activity | IEP | Predicted GO |
BP | GO:0035556 | intracellular signal transduction | IEP | Predicted GO |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Predicted GO |
MF | GO:0098772 | molecular function regulator | IEP | Predicted GO |
MF | GO:0099106 | ion channel regulator activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000743 | Glyco_hydro_28 | 84 | 399 |
No external refs found! |