GRMZM2G421495


Description : pleiotropic drug resistance 12


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G421495
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
181756 No alias pleiotropic drug resistance 3 0.02 Orthogroups_2024-Update
Glyma.08G201300 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 Orthogroups_2024-Update
Kfl00018_0500 kfl00018_0500_v1.1 (q8gu90|pdr3_orysa : 1455.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
LOC_Os08g29570 No alias pleiotropic drug resistance protein 3, putative, expressed 0.04 Orthogroups_2024-Update
MA_105476g0010 No alias (q2pcf1|pdr2_nicpl : 1910.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
Potri.003G049600 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Orthogroups_2024-Update
Seita.5G221600.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.003G216166.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sopen01g044530 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update
Sopen05g032100 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 176 358
IPR013581 PDR_assoc 733 794
IPR003439 ABC_transporter-like 879 1031
IPR013525 ABC_2_trans 1176 1390
IPR013525 ABC_2_trans 511 723
IPR029481 ABC_trans_N 102 151
No external refs found!