GRMZM2G421495

Description : pleiotropic drug resistance 12

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G421495
Cluster	HCCA clusters: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
181756	No alias	pleiotropic drug resistance 3	0.02	Orthogroups_2024-Update
Glyma.08G201300	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	Orthogroups_2024-Update
Kfl00018_0500	kfl00018_0500_v1.1	(q8gu90\|pdr3_orysa : 1455.0) Pleiotropic drug resistance...	0.02	Orthogroups_2024-Update
LOC_Os08g29570	No alias	pleiotropic drug resistance protein 3, putative, expressed	0.04	Orthogroups_2024-Update
MA_105476g0010	No alias	(q2pcf1\|pdr2_nicpl : 1910.0) Pleiotropic drug resistance...	0.04	Orthogroups_2024-Update
Potri.003G049600	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.02	Orthogroups_2024-Update
Seita.5G221600.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Sobic.003G216166.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Sopen01g044530	No alias	ABC-2 type transporter	0.02	Orthogroups_2024-Update
Sopen05g032100	No alias	ABC-2 type transporter	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Predicted GO
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	176	358
IPR013581	PDR_assoc	733	794
IPR003439	ABC_transporter-like	879	1031
IPR013525	ABC_2_trans	1176	1390
IPR013525	ABC_2_trans	511	723
IPR029481	ABC_trans_N	102	151

External Links

No external refs found!