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  5. GRMZM2G431850

GRMZM2G431850


Description : rna processing factor 2


Gene families : OG_42_0000929 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G431850
Cluster HCCA clusters: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Bradi1g14190 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G002890.6 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os04g28234 No alias Rf1, mitochondrial precursor, putative, expressed 0.02 Orthogroups_2024-Update
Seita.8G167800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G028200.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G028300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G168000.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 408 457
IPR002885 Pentatricopeptide_repeat 272 317
IPR002885 Pentatricopeptide_repeat 127 173
IPR002885 Pentatricopeptide_repeat 622 667
IPR002885 Pentatricopeptide_repeat 198 247
IPR002885 Pentatricopeptide_repeat 513 560
IPR002885 Pentatricopeptide_repeat 691 721
IPR002885 Pentatricopeptide_repeat 342 371
IPR002885 Pentatricopeptide_repeat 377 406
IPR002885 Pentatricopeptide_repeat 587 615
IPR002885 Pentatricopeptide_repeat 483 510
No external refs found!