Description : DNA topoisomerase, type IA, core
Gene families : OG_42_0003704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003704_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Zea release: GRMZM2G443881 | |
Cluster | HCCA clusters: Cluster_35 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At4g31210 | No alias | DNA topoisomerase, type IA, core... | 0.03 | Orthogroups_2024-Update | |
Bradi1g43607 | No alias | DNA topoisomerase, type IA, core | 0.03 | Orthogroups_2024-Update | |
Potri.006G279700 | No alias | DNA topoisomerase, type IA, core | 0.03 | Orthogroups_2024-Update | |
Seita.4G124200.1 | No alias | type-Ia DNA topoisomerase | 0.03 | Orthogroups_2024-Update | |
Sobic.010G051700.1 | No alias | type-Ia DNA topoisomerase | 0.03 | Orthogroups_2024-Update | |
Solyc02g081910 | No alias | DNA topoisomerase (AHRD V3.3 *** K4BA61_SOLLC) | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
MF | GO:0003916 | DNA topoisomerase activity | IEA | InterProScan predictions |
CC | GO:0005694 | chromosome | IEA | InterProScan predictions |
BP | GO:0006265 | DNA topological change | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | Predicted GO |
MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Predicted GO |
MF | GO:0004784 | superoxide dismutase activity | IEP | Predicted GO |
MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | Predicted GO |
MF | GO:0008131 | primary amine oxidase activity | IEP | Predicted GO |
MF | GO:0016636 | oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | IEP | Predicted GO |
MF | GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | IEP | Predicted GO |
MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Predicted GO |
CC | GO:0032993 | protein-DNA complex | IEP | Predicted GO |
CC | GO:0044427 | chromosomal part | IEP | Predicted GO |
CC | GO:0044815 | DNA packaging complex | IEP | Predicted GO |
MF | GO:0051743 | red chlorophyll catabolite reductase activity | IEP | Predicted GO |
No external refs found! |