At1g60960

Description : IRT3 [Source:UniProtKB/TrEMBL;Acc:A0A178WHL0]

Gene families : OG_42_0000242 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At1g60960
Cluster	HCCA clusters: Cluster_215

Target	Alias	Description	ECC score	Gene Family Method
A4A49_32895	No alias	zinc transporter 5	0.03	Orthogroups_2024-Update
At2g32270	No alias	Zinc transporter 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG3]	0.04	Orthogroups_2024-Update
Brara.A00489.1	No alias	metal cation transporter *(ZIP)	0.04	Orthogroups_2024-Update
Brara.H00723.1	No alias	metal cation transporter *(ZIP) &...	0.03	Orthogroups_2024-Update
Glyma.06G052000	No alias	iron regulated transporter 3	0.03	Orthogroups_2024-Update
LOC_Os03g46454	No alias	metal cation transporter, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os08g10630	No alias	metal cation transporter, putative, expressed	0.03	Orthogroups_2024-Update
Seita.7G234300.1	No alias	metal cation transporter *(ZIP)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	IEA	InterProScan predictions
MF	GO:0046873	metal ion transmembrane transporter activity	IEA	InterProScan predictions
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
MF	GO:0004568	chitinase activity	IEP	Predicted GO
BP	GO:0006022	aminoglycan metabolic process	IEP	Predicted GO
BP	GO:0006026	aminoglycan catabolic process	IEP	Predicted GO
BP	GO:0006030	chitin metabolic process	IEP	Predicted GO
BP	GO:0006032	chitin catabolic process	IEP	Predicted GO
BP	GO:0006040	amino sugar metabolic process	IEP	Predicted GO
MF	GO:0008061	chitin binding	IEP	Predicted GO
BP	GO:0009056	catabolic process	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Predicted GO
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Predicted GO
BP	GO:0042737	drug catabolic process	IEP	Predicted GO
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044248	cellular catabolic process	IEP	Predicted GO
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Predicted GO
BP	GO:0046348	amino sugar catabolic process	IEP	Predicted GO
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Predicted GO
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Predicted GO
BP	GO:1901575	organic substance catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003689	ZIP	61	422

External Links

No external refs found!