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  5. GRMZM2G457621

GRMZM2G457621


Description : Function unknown


Gene families : OG_42_0006514 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006514_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G457621
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
At3g04550 No alias Rubisco accumulation factor 1.2, chloroplastic... 0.03 Orthogroups_2024-Update
Brara.F02900.1 No alias assembly factor involved in RuBisCo assembly *(RAF1) 0.04 Orthogroups_2024-Update
HORVU1Hr1G037650.5 No alias assembly factor involved in RuBisCo assembly *(RAF1) 0.03 Orthogroups_2024-Update
Potri.013G044900 No alias Function unknown 0.03 Orthogroups_2024-Update
Seita.9G237700.1 No alias assembly factor involved in RuBisCo assembly *(RAF1) 0.03 Orthogroups_2024-Update
Solyc11g006060 No alias Rubisco accumulation factor 1.1, chloroplastic (AHRD... 0.02 Orthogroups_2024-Update
Sopen11g002000 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004357 glutamate-cysteine ligase activity IEP Predicted GO
MF GO:0004418 hydroxymethylbilane synthase activity IEP Predicted GO
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Predicted GO
BP GO:0006144 purine nucleobase metabolic process IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009113 purine nucleobase biosynthetic process IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!