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  5. GRMZM2G458665

GRMZM2G458665


Description : DDT domain superfamily


Gene families : OG_42_0002059 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002059_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G458665
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Bradi1g54700 No alias DDT domain superfamily 0.04 Orthogroups_2024-Update
Glyma.04G176500 No alias DDT domain superfamily 0.03 Orthogroups_2024-Update
Kfl00226_0080 kfl00226_0080_v1.1 (at1g18950 : 149.0) DDT domain superfamily; CONTAINS... 0.01 Orthogroups_2024-Update
Solyc03g113500 No alias Aminoacyl-tRNA synthetase (AHRD V3.3 *** Q2PF39_TRIPR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0019905 syntaxin binding IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR028942 WHIM1_dom 234 265
IPR018501 DDT_dom 144 189
No external refs found!