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  5. GRMZM2G467799

GRMZM2G467799


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG_42_0000148 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000148_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G467799
Cluster HCCA clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
At3g06400 No alias Chromatin-remodeling complex ATPase... 0.03 Orthogroups_2024-Update
Bradi1g18910 No alias chromatin remodeling 5 0.04 Orthogroups_2024-Update
Bradi1g26940 No alias chromatin remodeling 4 0.03 Orthogroups_2024-Update
Bradi1g47367 No alias chromatin remodeling factor CHD3 (PICKLE) 0.03 Orthogroups_2024-Update
Bradi2g35740 No alias chromatin-remodeling protein 11 0.02 Orthogroups_2024-Update
Cre03.g162701 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Cre03.g179300 No alias chromatin remodeling 5 0.01 Orthogroups_2024-Update
Cre07.g325700 No alias transcription regulatory protein SNF2, putative 0.03 Orthogroups_2024-Update
Glyma.02G281000 No alias chromatin remodeling 5 0.03 Orthogroups_2024-Update
Glyma.04G062400 No alias chromatin remodeling factor CHD3 (PICKLE) 0.03 Orthogroups_2024-Update
Glyma.11G004100 No alias Homeotic gene regulator 0.03 Orthogroups_2024-Update
Glyma.14G033600 No alias chromatin remodeling 5 0.05 Orthogroups_2024-Update
Glyma.17G022300 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Kfl00010_0280 kfl00010_0280_v1.1 (at3g06010 : 961.0) Encodes AtCHR12, a SNF2/Brahma-type... 0.03 Orthogroups_2024-Update
Kfl00223_0110 kfl00223_0110_v1.1 (at2g44980 : 444.0) SNF2 domain-containing protein /... 0.02 Orthogroups_2024-Update
LOC_Os05g05780 No alias chromatin-remodeling complex ATPase chain, putative, expressed 0.03 Orthogroups_2024-Update
MA_102992g0010 No alias (q7g8y3|isw2_orysa : 400.0) Probable chromatin... 0.03 Orthogroups_2024-Update
Mp2g26680.1 No alias CHD3-type chromatin-remodeling factor PICKLE... 0.02 Orthogroups_2024-Update
Potri.001G253400 No alias chromatin remodeling 5 0.03 Orthogroups_2024-Update
Seita.4G050000.1 No alias CHD3-type chromatin remodeling factor *(PKL/PKR) 0.02 Orthogroups_2024-Update
Sobic.002G308700.1 No alias CHD3-type chromatin remodeling factor *(PKL/PKR) 0.07 Orthogroups_2024-Update
Solyc08g029130 No alias chromatin remodeling factor CHD3 (PICKLE) (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen01g029280 No alias SNF2 family N-terminal domain 0.03 Orthogroups_2024-Update
evm.model.tig00000802.67 No alias (at3g06010 : 465.0) Encodes AtCHR12, a SNF2/Brahma-type... 0.02 Orthogroups_2024-Update
evm.model.tig00021623.13 No alias (at2g25170 : 464.0) Encodes a SWI/SWF nuclear-localized... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0042393 histone binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
BP GO:0000724 double-strand break repair via homologous recombination IEP Predicted GO
BP GO:0000725 recombinational repair IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004363 glutathione synthase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006750 glutathione biosynthetic process IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0006906 vesicle fusion IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016050 vesicle organization IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Predicted GO
BP GO:0048284 organelle fusion IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0061025 membrane fusion IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0090174 organelle membrane fusion IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 61 174
IPR029295 SnAC 268 362
No external refs found!