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  5. GRMZM2G471348

GRMZM2G471348


Description : pentatricopeptide (PPR) repeat-containing protein


Gene families : OG_42_0009240 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G471348
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Brara.I04605.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G072300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G072900.2 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc04g054290 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 282 310
IPR002885 Pentatricopeptide_repeat 313 343
IPR002885 Pentatricopeptide_repeat 549 577
IPR002885 Pentatricopeptide_repeat 518 540
IPR002885 Pentatricopeptide_repeat 386 411
IPR002885 Pentatricopeptide_repeat 754 778
IPR002885 Pentatricopeptide_repeat 443 492
IPR002885 Pentatricopeptide_repeat 578 625
IPR002885 Pentatricopeptide_repeat 680 727
IPR032867 DYW_dom 854 977
No external refs found!