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  5. GRMZM2G472226

GRMZM2G472226


Description : Protein of unknown function (DUF1677)


Gene families : OG_42_0000341 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000341_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G472226
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
At1g79770 No alias CASP-like protein (DUF1677) [Source:UniProtKB/TrEMBL;Acc:Q9CA85] 0.02 Orthogroups_2024-Update
Bradi1g21590 No alias Protein of unknown function (DUF1677) 0.02 Orthogroups_2024-Update
Bradi2g19470 No alias Protein of unknown function (DUF1677) 0.03 Orthogroups_2024-Update
Brara.C03878.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H00783.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G080567 No alias Protein of unknown function (DUF1677) 0.04 Orthogroups_2024-Update
Glyma.11G006300 No alias Protein of unknown function (DUF1677) 0.03 Orthogroups_2024-Update
Glyma.15G019000 No alias Protein of unknown function (DUF1677) 0.03 Orthogroups_2024-Update
Glyma.17G048300 No alias Protein of unknown function (DUF1677) 0.03 Orthogroups_2024-Update
Glyma.20G147100 No alias Protein of unknown function (DUF1677) 0.03 Orthogroups_2024-Update
MA_8331213g0010 No alias (at1g79770 : 127.0) Protein of unknown function... 0.02 Orthogroups_2024-Update
MA_94444g0010 No alias (at1g72510 : 104.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
Potri.006G237300 No alias Protein of unknown function (DUF1677) 0.03 Orthogroups_2024-Update
Solyc01g066000 No alias LOW QUALITY:DUF1677 family protein (DUF1677) (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc03g122300 No alias DUF1677 family protein (DUF1677) (AHRD V3.3 *** AT1G72510.2) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR012876 DUF1677_pln 6 101
No external refs found!