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GRMZM2G474658


Description : ABC-2 type transporter family protein


Gene families : OG_42_0001141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G474658
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Brara.G01658.1 No alias subfamily ABCG transporter & jasmonic acid transporter *(JAT) 0.02 Orthogroups_2024-Update
Brara.I03774.1 No alias subfamily ABCG transporter & jasmonic acid transporter *(JAT) 0.03 Orthogroups_2024-Update
HORVU1Hr1G009920.2 No alias subfamily ABCG transporter & jasmonic acid transporter *(JAT) 0.03 Orthogroups_2024-Update
Seita.3G042600.1 No alias subfamily ABCG transporter & jasmonic acid transporter *(JAT) 0.03 Orthogroups_2024-Update
Sobic.009G022000.1 No alias subfamily ABCG transporter & jasmonic acid transporter *(JAT) 0.03 Orthogroups_2024-Update
Solyc04g010200 No alias ABC transporter G family member (AHRD V3.3 *** A0A0K9NPK2_ZOSMR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000726 non-recombinational repair IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
CC GO:0015629 actin cytoskeleton IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 89 242
IPR013525 ABC_2_trans 407 616
No external refs found!