1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. GRMZM2G475017

GRMZM2G475017


Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG_42_0000464 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000464_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G475017
Cluster HCCA clusters: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
A4A49_36084 No alias zinc finger ccch domain-containing protein 32 0.01 Orthogroups_2024-Update
Bradi2g09340 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 Orthogroups_2024-Update
Bradi4g39137 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.04 Orthogroups_2024-Update
Kfl00212_0080 kfl00212_0080_v1.... (q5jlb5|zfnl2_orysa : 319.0) Zinc finger CCCH... 0.01 Orthogroups_2024-Update
LOC_Os01g15460 No alias zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 0.03 Orthogroups_2024-Update
Potri.015G089100 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 Orthogroups_2024-Update
Pp1s102_155V6 No alias nucleic acid binding 0.02 Orthogroups_2024-Update
Pp1s6_324V6 No alias nucleic acid binding 0.02 Orthogroups_2024-Update
Solyc06g008740 No alias Zinc finger transcription factor 40 0.02 Orthogroups_2024-Update
Solyc09g074640 No alias Zinc finger transcription factor 54 0.02 Orthogroups_2024-Update
Solyc11g008900 No alias Zinc finger transcription factor 65 0.03 Orthogroups_2024-Update
Sopen01g029500 No alias Zinc finger C-x8-C-x5-C-x3-H type (and similar) 0.02 Orthogroups_2024-Update
Sopen03g030700 No alias Zinc finger C-x8-C-x5-C-x3-H type (and similar) 0.02 Orthogroups_2024-Update
Sopen06g003530 No alias Zinc finger C-x8-C-x5-C-x3-H type (and similar) 0.02 Orthogroups_2024-Update
Sopen11g004680 No alias Zinc finger C-x8-C-x5-C-x3-H type (and similar) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
CC GO:0070652 HAUS complex IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 90 115
IPR000571 Znf_CCCH 288 313
IPR000571 Znf_CCCH 43 68
IPR000571 Znf_CCCH 335 359
IPR000571 Znf_CCCH 135 159
No external refs found!