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  5. GRMZM2G475897

GRMZM2G475897


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0004371 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004371_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G475897
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
PSME_00001955-RA No alias (at1g18900 : 775.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 393 438
IPR002885 Pentatricopeptide_repeat 498 544
IPR002885 Pentatricopeptide_repeat 602 649
IPR002885 Pentatricopeptide_repeat 460 491
IPR002885 Pentatricopeptide_repeat 571 600
IPR002885 Pentatricopeptide_repeat 362 389
No external refs found!