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GRMZM2G476593


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0008731 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008731_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G476593
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Bradi1g64080 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
MA_121102g0010 No alias (at4g02750 : 643.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
MA_177540g0010 No alias (at4g02750 : 711.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
Seita.9G424600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen06g023080 No alias PPR repeat 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Predicted GO
BP GO:0019748 secondary metabolic process IEP Predicted GO
BP GO:0044550 secondary metabolite biosynthetic process IEP Predicted GO
BP GO:0046937 phytochelatin metabolic process IEP Predicted GO
BP GO:0046938 phytochelatin biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 371 393
IPR002885 Pentatricopeptide_repeat 473 496
IPR002885 Pentatricopeptide_repeat 270 296
IPR002885 Pentatricopeptide_repeat 50 77
IPR002885 Pentatricopeptide_repeat 237 263
IPR002885 Pentatricopeptide_repeat 206 235
IPR002885 Pentatricopeptide_repeat 300 329
IPR002885 Pentatricopeptide_repeat 397 444
IPR002885 Pentatricopeptide_repeat 172 205
IPR032867 DYW_dom 572 667
IPR002885 Pentatricopeptide_repeat 141 170
IPR002885 Pentatricopeptide_repeat 109 139
No external refs found!