GRMZM2G477872

Description : pleiotropic drug resistance 11

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G477872
Cluster	HCCA clusters: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method
415867	No alias	pleiotropic drug resistance 12	0.01	Orthogroups_2024-Update
A4A49_09052	No alias	pleiotropic drug resistance protein 1	0.03	Orthogroups_2024-Update
A4A49_23886	No alias	pleiotropic drug resistance protein 1	0.03	Orthogroups_2024-Update
At2g29940	No alias	ABC transporter G family member 31...	0.02	Orthogroups_2024-Update
Bradi1g35680	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Bradi2g04847	No alias	pleiotropic drug resistance 4	0.02	Orthogroups_2024-Update
GRMZM2G143139	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
Glyma.02G159900	No alias	pleiotropic drug resistance 11	0.02	Orthogroups_2024-Update
Glyma.17G120100	No alias	pleiotropic drug resistance 4	0.02	Orthogroups_2024-Update
HORVU3Hr1G071470.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
MA_10426781g0010	No alias	(at2g36380 : 1292.0) pleiotropic drug resistance 6...	0.03	Orthogroups_2024-Update
Mp4g05490.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
PSME_00001267-RA	No alias	(q5z9s8\|pdr12_orysa : 1556.0) Pleiotropic drug...	0.02	Orthogroups_2024-Update
PSME_00009473-RA	No alias	(at2g26910 : 1773.0) pleiotropic drug resistance 4...	0.02	Orthogroups_2024-Update
Potri.018G074500	No alias	pleiotropic drug resistance 4	0.05	Orthogroups_2024-Update
Sobic.003G216000.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Sobic.006G114100.4	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Sobic.010G165500.3	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Sopen05g033770	No alias	ABC-2 type transporter	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	Predicted GO
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Predicted GO
MF	GO:0008061	chitin binding	IEP	Predicted GO
BP	GO:0046168	glycerol-3-phosphate catabolic process	IEP	Predicted GO
BP	GO:0052646	alditol phosphate metabolic process	IEP	Predicted GO
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	127	310
IPR003439	ABC_transporter-like	833	984
IPR013581	PDR_assoc	700	762
IPR013525	ABC_2_trans	465	695
IPR013525	ABC_2_trans	1130	1352

External Links

No external refs found!

GRMZM2G477872

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation