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At1g62310


Description : Transcription factor jumonji (JmjC) domain-containing protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV12]


Gene families : OG_42_0000491 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000491_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g62310
Cluster HCCA clusters: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
Glyma.13G247400 No alias Zinc finger, RING-type;Transcription factor... 0.04 Orthogroups_2024-Update
HORVU6Hr1G005010.1 No alias histone demethylase *(KDM3) 0.02 Orthogroups_2024-Update
Seita.1G376400.1 No alias histone demethylase *(KDM3) 0.04 Orthogroups_2024-Update
Seita.2G196000.1 No alias histone demethylase *(KDM3) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003347 JmjC_dom 743 846
IPR018866 Znf-4CXXC_R1 204 275
No external refs found!