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  5. GRMZM2G478553

GRMZM2G478553


Description : RING/U-box superfamily protein


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G478553
Cluster HCCA clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
A4A49_18116 No alias ring-h2 finger protein atl78 0.04 Orthogroups_2024-Update
A4A49_20151 No alias putative ring-h2 finger protein atl61 0.03 Orthogroups_2024-Update
A4A49_21361 No alias ring-h2 finger protein atl78 0.02 Orthogroups_2024-Update
A4A49_36993 No alias ring-h2 finger protein atl52 0.03 Orthogroups_2024-Update
A4A49_40065 No alias ring-h2 finger protein atl70 0.03 Orthogroups_2024-Update
At1g35330 No alias RING/U-box superfamily protein [Source:TAIR;Acc:AT1G35330] 0.02 Orthogroups_2024-Update
At2g17450 No alias Probable E3 ubiquitin-protein ligase ATL44... 0.04 Orthogroups_2024-Update
At3g05200 No alias E3 ubiquitin-protein ligase ATL6... 0.03 Orthogroups_2024-Update
At3g19140 No alias Putative RING-H2 finger protein ATL62... 0.02 Orthogroups_2024-Update
At5g10380 No alias E3 ubiquitin-protein ligase RING1... 0.04 Orthogroups_2024-Update
Bradi1g46750 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi5g19490 No alias RING-H2 finger A3A 0.02 Orthogroups_2024-Update
Brara.A03446.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B02994.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.C03353.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.E00161.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E00283.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.E01533.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E02957.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.G01087.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.G01336.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.G03107.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.H00897.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.K00650.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Cre11.g476250 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.01 Orthogroups_2024-Update
Glyma.03G203400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G042400 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Glyma.10G289100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G025700 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G069980.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU5Hr1G079930.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G042940.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G121570.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os01g64620 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g33720 No alias RING-H2 finger protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g35144 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g45060 No alias RING-H2 finger protein ATL2M, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g11450 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g16060 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_101154g0010 No alias (at3g16720 : 130.0) RING-H2 protein induced after... 0.03 Orthogroups_2024-Update
MA_107765g0010 No alias (at1g72200 : 140.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_12352g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_12363g0010 No alias (at1g72310 : 126.0) Encodes a putative RING-H2 zinc... 0.03 Orthogroups_2024-Update
MA_226198g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_31462g0010 No alias (at1g49220 : 101.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_38494g0010 No alias (at1g49230 : 119.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_80729g0030 No alias (at3g16720 : 139.0) RING-H2 protein induced after... 0.03 Orthogroups_2024-Update
MA_94359g0010 No alias (at4g35480 : 121.0) Encodes a putative RING-H2 finger... 0.03 Orthogroups_2024-Update
PSME_00003016-RA No alias (at1g72200 : 114.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00003022-RA No alias (at1g72200 : 164.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00011913-RA No alias (at3g51430 : 162.0) Although this enzyme is predicted to... 0.02 Orthogroups_2024-Update
PSME_00034763-RA No alias (at5g05280 : 85.1) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00051567-RA No alias (at3g16720 : 108.0) RING-H2 protein induced after... 0.02 Orthogroups_2024-Update
PSME_00057213-RA No alias (at1g72310 : 115.0) Encodes a putative RING-H2 zinc... 0.03 Orthogroups_2024-Update
Potri.002G101800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G144200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.007G057300 No alias RING-H2 finger A3A 0.02 Orthogroups_2024-Update
Potri.008G018900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G219200 No alias TOXICOS EN LEVADURA 2 0.02 Orthogroups_2024-Update
Potri.011G063100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.012G003900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G067900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G010500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G091400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G197500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.1G197600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.1G252600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.1G279400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.1G379200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.2G238400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.4G042500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.5G023000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.5G309700.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.7G095300.1 No alias regulatory ubiquitin-protein ligase *(PRU2) &... 0.04 Orthogroups_2024-Update
Seita.9G410900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G232800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.003G147301.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.004G181200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G181300.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.004G181400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.004G187800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.004G305000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G358200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.009G205400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.010G071000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Solyc04g074820 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc12g087860 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen03g031440 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 125 168
No external refs found!