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  5. At1g62980

At1g62980


Description : Expansin-A18 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ07]


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g62980
Cluster HCCA clusters: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
A4A49_04302 No alias expansin-a10 0.05 Orthogroups_2024-Update
A4A49_26925 No alias expansin-a10 0.03 Orthogroups_2024-Update
A4A49_61517 No alias expansin-a23 0.04 Orthogroups_2024-Update
At3g29030 No alias At3g29030 [Source:UniProtKB/TrEMBL;Acc:Q1ECM3] 0.05 Orthogroups_2024-Update
At5g39270 No alias Expansin-A22 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL80] 0.03 Orthogroups_2024-Update
Glyma.13G336600 No alias expansin A4 0.04 Orthogroups_2024-Update
Glyma.14G221500 No alias expansin 11 0.04 Orthogroups_2024-Update
Glyma.18G265400 No alias expansin A23 0.04 Orthogroups_2024-Update
HORVU1Hr1G069830.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Mp4g22180.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00025835-RA No alias (at1g26770 : 394.0) Encodes an expansin. Naming... 0.03 Orthogroups_2024-Update
Potri.008G057100 No alias expansin A4 0.03 Orthogroups_2024-Update
Seita.7G029300.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Solyc12g089380 No alias expansin 8 0.03 Orthogroups_2024-Update
Sopen04g035500 No alias Pollen allergen 0.04 Orthogroups_2024-Update
Sopen09g010480 No alias Pollen allergen 0.04 Orthogroups_2024-Update
Sopen10g034230 No alias Pollen allergen 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 66 152
IPR007117 Expansin_CBD 163 241
No external refs found!