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  5. Solyc01g016540

Solyc01g016540


Description : plant/protein (DUF789) (AHRD V3.3 *** AT1G03610.1)


Gene families : OG_42_0000507 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000507_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g016540
Cluster HCCA clusters: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Solyc01g016510 No alias No description available 0.03 Orthogroups_2024-Update
Sopen01g002080 No alias Protein of unknown function (DUF789) 0.04 Orthogroups_2024-Update
Sopen09g030300 No alias Protein of unknown function (DUF789) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
InterPro domains Description Start Stop
IPR008507 DUF789 14 304
No external refs found!