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At1g63080


Description : Pentatricopeptide repeat-containing protein At1g63080, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9CAN5]


Gene families : OG_42_0000374 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g63080
Cluster HCCA clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
A4A49_23115 No alias putative pentatricopeptide repeat-containing protein,... 0.04 Orthogroups_2024-Update
At1g63070 No alias Pentatricopeptide repeat-containing protein At1g63070,... 0.04 Orthogroups_2024-Update
Glyma.09G175701 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.16G162100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Solyc06g007280 No alias Pentatricopeptide repeat protein (AHRD V3.3 *-* A0A1B3IPW0_CAPAN) 0.02 Orthogroups_2024-Update
Sopen06g002220 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
CC GO:0000781 chromosome, telomeric region IEP Predicted GO
CC GO:0000784 nuclear chromosome, telomeric region IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 45 59
IPR002885 Pentatricopeptide_repeat 130 162
IPR002885 Pentatricopeptide_repeat 95 126
IPR002885 Pentatricopeptide_repeat 308 356
IPR002885 Pentatricopeptide_repeat 518 564
IPR002885 Pentatricopeptide_repeat 168 217
IPR002885 Pentatricopeptide_repeat 378 425
IPR002885 Pentatricopeptide_repeat 239 287
IPR002885 Pentatricopeptide_repeat 448 497
No external refs found!