1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At1g63680

At1g63680


Description : UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4I3P9]


Gene families : OG_42_0005923 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005923_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g63680
Cluster HCCA clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
148635 No alias acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases 0.02 Orthogroups_2024-Update
Bradi3g32820 No alias acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases 0.04 Orthogroups_2024-Update
Cre12.g519900 No alias acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases 0.01 Orthogroups_2024-Update
Mp6g20740.1 No alias PAP11/MURE cofactor of plastid-encoded RNA polymerase 0.02 Orthogroups_2024-Update
Pp1s101_215V6 No alias udp-n-acetylmuramoylalanyl-d-glutamate-- -diaminopimelate ligase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0009058 biosynthetic process IEA InterProScan predictions
MF GO:0016874 ligase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0010024 phytochromobilin biosynthetic process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
MF GO:0050897 cobalt ion binding IEP Predicted GO
BP GO:0051202 phytochromobilin metabolic process IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR000713 Mur_ligase_N 264 337
IPR004101 Mur_ligase_C 577 660
IPR013221 Mur_ligase_cen 349 556
No external refs found!