GRMZM2G565140


Description : putative mitochondrial RNA helicase 2


Gene families : OG_42_0000844 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000844_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G565140
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Brara.E01722.1 No alias group-II intron splicing RNA helicase *(PMH) 0.04 Orthogroups_2024-Update
Glyma.14G033400 No alias putative mitochondrial RNA helicase 2 0.02 Orthogroups_2024-Update
HORVU5Hr1G011460.1 No alias group-II intron splicing RNA helicase *(PMH) 0.02 Orthogroups_2024-Update
Kfl00158_0080 kfl00158_0080_v1.1 (at5g62190 : 590.0) DEAD/DEAH box RNA helicase PRH75;... 0.02 Orthogroups_2024-Update
LOC_Os12g41715 No alias DEAD-box ATP-dependent RNA helicase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.006G024100 No alias putative mitochondrial RNA helicase 2 0.03 Orthogroups_2024-Update
Pp1s163_96V6 No alias dead box atp-dependent rna 0.02 Orthogroups_2024-Update
Seita.3G386700.1 No alias group-II intron splicing RNA helicase *(PMH) 0.04 Orthogroups_2024-Update
Seita.9G027200.1 No alias group-II intron splicing RNA helicase *(RH3) 0.03 Orthogroups_2024-Update
Sobic.002G031700.1 No alias group-II intron splicing RNA helicase *(PMH) 0.04 Orthogroups_2024-Update
Sobic.002G268100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G165900.1 No alias group-II intron splicing RNA helicase *(PMH) 0.04 Orthogroups_2024-Update
Solyc07g044760 No alias RNA helicase DEAD23 0.02 Orthogroups_2024-Update
evm.model.contig_3385.6 No alias (at5g26742 : 365.0) embryo defective 1138 (emb1138);... 0.01 Orthogroups_2024-Update
evm.model.contig_3450.5 No alias (q41382|rh7_spiol : 422.0) DEAD-box ATP-dependent RNA... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
CC GO:0005795 Golgi stack IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
BP GO:0006449 regulation of translational termination IEP Predicted GO
BP GO:0006452 translational frameshifting IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0031984 organelle subcompartment IEP Predicted GO
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043243 positive regulation of protein complex disassembly IEP Predicted GO
BP GO:0043244 regulation of protein complex disassembly IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
BP GO:0045727 positive regulation of translation IEP Predicted GO
BP GO:0045901 positive regulation of translational elongation IEP Predicted GO
BP GO:0045905 positive regulation of translational termination IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051247 positive regulation of protein metabolic process IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098791 Golgi subcompartment IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 195 304
IPR011545 DEAD/DEAH_box_helicase_dom 2 158
No external refs found!