1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g043920

Solyc03g043920


Description : Xyloglucan alpha-1,6-xylosyltransferase (AHRD V3.3 *** X2CZ83_PINRA)


Gene families : OG_42_0000333 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000333_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g043920
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Brara.C02806.1 No alias 1,6-alpha-xylosyltransferase *(XXT) 0.03 Orthogroups_2024-Update
Brara.G03182.1 No alias 1,6-alpha-xylosyltransferase *(XXT) 0.03 Orthogroups_2024-Update
LOC_Os03g19330 No alias glycosyltransferase, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s216_58V6 No alias xyloglucan 6- 0.02 Orthogroups_2024-Update
Pp1s298_59V6 No alias xyloglucan 6- 0.03 Orthogroups_2024-Update
Pp1s74_206V6 No alias xyloglucan 6- 0.02 Orthogroups_2024-Update
Seita.8G145500.1 No alias galactoglucomannan galactosyltransferase *(MUCI10) 0.02 Orthogroups_2024-Update
Solyc02g092210 No alias Alpha-6-galactosyltransferase (AHRD V3.3 *** Q5TIN2_SOLTU) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0016757 transferase activity, transferring glycosyl groups IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
CC GO:1902554 serine/threonine protein kinase complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
CC GO:1990316 Atg1/ULK1 kinase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR008630 Glyco_trans_34 125 392
No external refs found!