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  5. At1g65430

At1g65430


Description : RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A178WLP2]


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g65430
Cluster HCCA clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Brara.B03864.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G165100.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0004399 histidinol dehydrogenase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0010011 auxin binding IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0042562 hormone binding IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 197 259
IPR002867 IBR_dom 276 324
No external refs found!