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At1g65440


Description : Transcription elongation factor SPT6 homolog [Source:UniProtKB/Swiss-Prot;Acc:A8MS85]


Gene families : OG_42_0003957 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003957_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g65440
Cluster HCCA clusters: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
Sopen10g031530 No alias SH2 domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR028231 Spt6_YqgF 715 871
IPR032706 Spt6_HHH 875 975
IPR028083 Spt6_acidic_N_dom 33 118
IPR035420 Spt6_SH2 1192 1409
No external refs found!