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Description : RNA-binding (RRM/RBD/RNP motifs) family protein
Gene families : OG_42_0003551 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003551_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea release: GRMZM5G803275 | |
| Cluster | HCCA clusters: Cluster_226 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Brara.H00210.1 | No alias | component *(Y14) of RNA quality control Exon Junction complex | 0.03 | Orthogroups_2024-Update | |
| evm.model.tig00021351.15 | No alias | (at1g51510 : 128.0) This gene is predicted to encode a... | 0.01 | Orthogroups_2024-Update | |
| evm.model.tig00021352.5 | No alias | (at1g51510 : 152.0) This gene is predicted to encode a... | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003747 | translation release factor activity | IEP | Predicted GO |
| MF | GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | IEP | Predicted GO |
| MF | GO:0004743 | pyruvate kinase activity | IEP | Predicted GO |
| MF | GO:0004806 | triglyceride lipase activity | IEP | Predicted GO |
| BP | GO:0006783 | heme biosynthetic process | IEP | Predicted GO |
| BP | GO:0006784 | heme a biosynthetic process | IEP | Predicted GO |
| MF | GO:0008079 | translation termination factor activity | IEP | Predicted GO |
| BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Predicted GO |
| MF | GO:0015924 | mannosyl-oligosaccharide mannosidase activity | IEP | Predicted GO |
| MF | GO:0016298 | lipase activity | IEP | Predicted GO |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
| MF | GO:0030955 | potassium ion binding | IEP | Predicted GO |
| MF | GO:0031420 | alkali metal ion binding | IEP | Predicted GO |
| BP | GO:0042168 | heme metabolic process | IEP | Predicted GO |
| BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
| BP | GO:0046034 | ATP metabolic process | IEP | Predicted GO |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Predicted GO |
| BP | GO:0046160 | heme a metabolic process | IEP | Predicted GO |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 95 | 163 |
| No external refs found! |