Description : RNA-binding (RRM/RBD/RNP motifs) family protein
Gene families : OG_42_0002471 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002471_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Zea release: GRMZM5G803433 | |
Cluster | HCCA clusters: Cluster_73 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At3g15010 | No alias | UBP1-associated protein 2C... | 0.02 | Orthogroups_2024-Update | |
LOC_Os01g42820 | No alias | RNA recognition motif containing protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
PSME_00019974-RA | No alias | (at3g15010 : 201.0) RNA-binding (RRM/RBD/RNP motifs)... | 0.02 | Orthogroups_2024-Update | |
Seita.5G225200.1 | No alias | regulatory protein *(UBA1/2) of UBP1 activity | 0.03 | Orthogroups_2024-Update | |
Solyc02g021560 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD... | 0.03 | Orthogroups_2024-Update | |
Solyc12g014210 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD... | 0.04 | Orthogroups_2024-Update | |
Sopen02g006100 | No alias | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 0.02 | Orthogroups_2024-Update | |
Sopen12g006000 | No alias | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | Predicted GO |
CC | GO:0005730 | nucleolus | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Predicted GO |
BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | Predicted GO |
BP | GO:0009314 | response to radiation | IEP | Predicted GO |
BP | GO:0009416 | response to light stimulus | IEP | Predicted GO |
BP | GO:0009581 | detection of external stimulus | IEP | Predicted GO |
BP | GO:0009582 | detection of abiotic stimulus | IEP | Predicted GO |
BP | GO:0009583 | detection of light stimulus | IEP | Predicted GO |
BP | GO:0009584 | detection of visible light | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
BP | GO:0018298 | protein-chromophore linkage | IEP | Predicted GO |
BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Predicted GO |
BP | GO:0051606 | detection of stimulus | IEP | Predicted GO |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
No external refs found! |