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  5. At1g66160

At1g66160


Description : U-box domain-containing protein 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8D1]


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g66160
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
426053 No alias plant U-box 24 0.02 Orthogroups_2024-Update
A4A49_22370 No alias u-box domain-containing protein 26 0.04 Orthogroups_2024-Update
A4A49_33780 No alias e3 ubiquitin-protein ligase pub23 0.04 Orthogroups_2024-Update
A4A49_34426 No alias e3 ubiquitin-protein ligase pub24 0.03 Orthogroups_2024-Update
Brara.B01640.1 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.E02265.1 No alias U-Box-group-III E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G055052 No alias CYS, MET, PRO, and GLY protein 1 0.05 Orthogroups_2024-Update
GRMZM2G071484 No alias plant U-box 22 0.03 Orthogroups_2024-Update
GRMZM5G811633 No alias plant U-box 26 0.03 Orthogroups_2024-Update
GRMZM5G855994 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G102900 No alias plant U-box 26 0.03 Orthogroups_2024-Update
Glyma.02G242900 No alias CYS, MET, PRO, and GLY protein 1 0.04 Orthogroups_2024-Update
Glyma.08G147200 No alias CYS, MET, PRO, and GLY protein 2 0.03 Orthogroups_2024-Update
Glyma.11G214500 No alias CYS, MET, PRO, and GLY protein 1 0.05 Orthogroups_2024-Update
Glyma.12G095100 No alias plant U-box 23 0.04 Orthogroups_2024-Update
Glyma.18G042100 No alias ARM repeat superfamily protein 0.05 Orthogroups_2024-Update
LOC_Os02g34410 No alias U-box domain-containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g34030 No alias U-box domain-containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g35680 No alias U-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_415393g0010 No alias (at3g19380 : 146.0) plant U-box 25 (PUB25); FUNCTIONS... 0.04 Orthogroups_2024-Update
MA_684442g0010 No alias (at3g52450 : 140.0) Encodes a cytoplasmically localized... 0.02 Orthogroups_2024-Update
PSME_00022617-RA No alias (at3g52450 : 247.0) Encodes a cytoplasmically localized... 0.02 Orthogroups_2024-Update
PSME_00043995-RA No alias (at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00048709-RA No alias (at2g35930 : 183.0) Encodes a cytoplasmically localized... 0.02 Orthogroups_2024-Update
PSME_00049378-RA No alias (at3g19380 : 185.0) plant U-box 25 (PUB25); FUNCTIONS... 0.02 Orthogroups_2024-Update
PSME_00054803-RA No alias (at3g52450 : 283.0) Encodes a cytoplasmically localized... 0.04 Orthogroups_2024-Update
PSME_00056516-RA No alias (at3g19380 : 420.0) plant U-box 25 (PUB25); FUNCTIONS... 0.05 Orthogroups_2024-Update
Potri.002G070500 No alias plant U-box 29 0.03 Orthogroups_2024-Update
Potri.007G110600 No alias ARM repeat superfamily protein 0.05 Orthogroups_2024-Update
Potri.009G016100 No alias plant U-box 24 0.04 Orthogroups_2024-Update
Potri.016G069500 No alias plant U-box 24 0.03 Orthogroups_2024-Update
Potri.017G135000 No alias ARM repeat superfamily protein 0.04 Orthogroups_2024-Update
Pp1s198_49V6 No alias F14J22.1; U-box domain-containing protein [Arabidopsis thaliana] 0.04 Orthogroups_2024-Update
Sobic.001G441100.1 No alias E3 ubiquitin ligase 0.06 Orthogroups_2024-Update
Sobic.004G169200.1 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.004G169900.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.004G275800.1 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.010G102000.1 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Solyc01g005160 No alias Avr9/Cf-9 rapidly elicited protein 1 0.04 Orthogroups_2024-Update
Solyc01g007010 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc04g008100 No alias U-box domain-containing protein (AHRD V3.3 *** A0A0A0RAL4_9ROSI) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003613 Ubox_domain 33 100
No external refs found!