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  5. GRMZM5G806257

GRMZM5G806257


Description : Trimeric LpxA-like enzyme


Gene families : OG_42_0006168 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM5G806257
Cluster HCCA clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Kfl00057_0210 kfl00057_0210_v1.1 (at2g34970 : 597.0) Trimeric LpxA-like enzyme; FUNCTIONS... 0.02 Orthogroups_2024-Update
Pp1s43_204V6 No alias eukaryotic translation initiation factor subunit 5 epsilon 0.02 Orthogroups_2024-Update
Sobic.004G340400.1 No alias component *(eIF2B-epsilon) of eIF2B eIF2-GDP recycling complex 0.03 Orthogroups_2024-Update
Sopen01g041760 No alias eIF4-gamma/eIF5/eIF2-epsilon 0.03 Orthogroups_2024-Update
evm.model.tig00021122.14 No alias (at2g34970 : 275.0) Trimeric LpxA-like enzyme; FUNCTIONS... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0009058 biosynthetic process IEA InterProScan predictions
MF GO:0016779 nucleotidyltransferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004057 arginyltransferase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016598 protein arginylation IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003307 W2_domain 656 735
IPR005835 NTP_transferase_dom 35 176
No external refs found!