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  5. At1g66630

At1g66630


Description : E3 ubiquitin-protein ligase SINA-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6H2]


Gene families : OG_42_0000590 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000590_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g66630
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
At5g37870 No alias Putative E3 ubiquitin-protein ligase SINA-like 6... 0.05 Orthogroups_2024-Update
Bradi5g07216 No alias Protein with RING/U-box and TRAF-like domains 0.02 Orthogroups_2024-Update
Brara.E01238.1 No alias E3 ubiquitin ligase *(SINA) 0.04 Orthogroups_2024-Update
Brara.G02658.1 No alias E3 ubiquitin ligase *(SINA) 0.03 Orthogroups_2024-Update
Brara.G02898.1 No alias E3 ubiquitin ligase *(SINA) 0.03 Orthogroups_2024-Update
LOC_Os01g03429 No alias expressed protein 0.04 Orthogroups_2024-Update
Solyc02g069880 No alias E3 ubiquitin-protein ligase (AHRD V3.3 *** M1BWA5_SOLTU) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan predictions
BP GO:0007275 multicellular organism development IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR018121 7-in-absentia-prot_TRAF-dom 93 162
No external refs found!