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GRMZM5G813259


Description : CRS1 / YhbY (CRM) domain-containing protein


Gene families : OG_42_0000921 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000921_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM5G813259
Cluster HCCA clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Brara.K01693.1 No alias plastidial RNA splicing factor *(CFM3) 0.02 Orthogroups_2024-Update
HORVU5Hr1G057460.11 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_10432072g0010 No alias (at3g23070 : 659.0) Encodes a CRM domain protein CFM3a,... 0.03 Orthogroups_2024-Update
Potri.006G149000 No alias CRS1 / YhbY (CRM) domain-containing protein 0.04 Orthogroups_2024-Update
Potri.012G056100 No alias CRS1 / YhbY (CRM) domain-containing protein 0.03 Orthogroups_2024-Update
Pp1s142_94V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.2G185900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G127900.1 No alias plastidial RNA splicing factor *(CFM2) 0.03 Orthogroups_2024-Update
Sobic.002G181000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G110200.2 No alias plastidial RNA splicing factor *(CFM2) 0.03 Orthogroups_2024-Update
Sobic.009G223200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc02g087250 No alias Chloroplastic group IIA intron splicing facilitator... 0.03 Orthogroups_2024-Update
Sopen02g031990 No alias CRS1 / YhbY (CRM) domain 0.02 Orthogroups_2024-Update
Sopen09g032270 No alias CRS1 / YhbY (CRM) domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 3 89
No external refs found!