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  5. At1g67230

At1g67230


Description : Protein CROWDED NUCLEI 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRT5]


Gene families : OG_42_0001967 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001967_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g67230
Cluster HCCA clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
A4A49_16931 No alias protein crowded nuclei 4 0.03 Orthogroups_2024-Update
Bradi3g53047 No alias little nuclei1 0.04 Orthogroups_2024-Update
GRMZM2G320013 No alias little nuclei4 0.02 Orthogroups_2024-Update
Glyma.02G101800 No alias nuclear matrix constituent protein-related 0.03 Orthogroups_2024-Update
Glyma.05G109300 No alias little nuclei4 0.04 Orthogroups_2024-Update
Glyma.08G256300 No alias little nuclei1 0.04 Orthogroups_2024-Update
Glyma.17G157900 No alias little nuclei4 0.04 Orthogroups_2024-Update
HORVU6Hr1G069560.1 No alias nuclear lamina lamin-like protein *(CRWN) 0.04 Orthogroups_2024-Update
Kfl00193_0080 kfl00193_0080_v1.1 (at1g67230 : 101.0) Encodes a nuclear coiled-coil... 0.02 Orthogroups_2024-Update
Mp3g21160.1 No alias CRWN nuclear lamina lamin-like protein 0.02 Orthogroups_2024-Update
Pp1s76_82V6 No alias F1N21.5; expressed protein [Arabidopsis thaliana] 0.01 Orthogroups_2024-Update
Seita.1G292700.1 No alias nuclear lamina lamin-like protein *(CRWN) 0.02 Orthogroups_2024-Update
Solyc03g045050 No alias Nuclear matrix constituent-like protein 1 (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen02g036530 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen03g009490 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0007155 cell adhesion IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0022610 biological adhesion IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!