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GRMZM5G840955


Description : AMP-dependent synthetase and ligase family protein


Gene families : OG_42_0001983 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001983_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM5G840955
Cluster HCCA clusters: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
141243 No alias long chain acyl-CoA synthetase 9 0.02 Orthogroups_2024-Update
Brara.C04007.1 No alias long-chain acyl-CoA synthetase *(LACS9) & EC_6.2 ligase... 0.03 Orthogroups_2024-Update
Glyma.13G079900 No alias long chain acyl-CoA synthetase 9 0.03 Orthogroups_2024-Update
Potri.005G177500 No alias long chain acyl-CoA synthetase 9 0.02 Orthogroups_2024-Update
Sopen12g003970 No alias AMP-binding enzyme 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 14 161
IPR025110 AMP-bd_C 170 260
No external refs found!