At1g68840

Description : TEM2 [Source:UniProtKB/TrEMBL;Acc:A0A178WNP0]

Gene families : OG_42_0000305 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At1g68840
Cluster	HCCA clusters: Cluster_160

Target	Alias	Description	ECC score	Gene Family Method
A4A49_27413	No alias	ap2erf and b3 domain-containing transcription factor rav1	0.04	Orthogroups_2024-Update
At1g13260	No alias	AP2/ERF and B3 domain-containing transcription factor...	0.03	Orthogroups_2024-Update
Brara.B01818.1	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.04	Orthogroups_2024-Update
Brara.D00076.1	No alias	RAV/NGATHA-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E00098.1	No alias	RAV/NGATHA-type transcription factor	0.04	Orthogroups_2024-Update
Brara.E00866.1	No alias	RAV/NGATHA-type transcription factor	0.06	Orthogroups_2024-Update
Brara.F00801.1	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.04	Orthogroups_2024-Update
Brara.H03121.1	No alias	RAV/NGATHA-type transcription factor	0.04	Orthogroups_2024-Update
Brara.J02597.1	No alias	RAV/NGATHA-type transcription factor	0.04	Orthogroups_2024-Update
Glyma.01G087500	No alias	AP2/B3 transcription factor family protein	0.05	Orthogroups_2024-Update
Glyma.02G099500	No alias	AP2/B3 transcription factor family protein	0.05	Orthogroups_2024-Update
Glyma.02G200500	No alias	AP2/B3-like transcriptional factor family protein	0.02	Orthogroups_2024-Update
Glyma.10G204400	No alias	AP2/B3 transcription factor family protein	0.04	Orthogroups_2024-Update
Glyma.19G261300	No alias	AP2/B3-like transcriptional factor family protein	0.04	Orthogroups_2024-Update
Glyma.20G186200	No alias	AP2/B3 transcription factor family protein	0.04	Orthogroups_2024-Update
HORVU3Hr1G010190.5	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.03	Orthogroups_2024-Update
LOC_Os01g04750	No alias	B3 DNA binding domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os01g04800	No alias	B3 DNA binding domain containing protein, expressed	0.04	Orthogroups_2024-Update
MA_10428163g0010	No alias	(at1g13260 : 267.0) Encodes an AP2/B3 domain...	0.03	Orthogroups_2024-Update
MA_10433425g0010	No alias	(at1g25560 : 91.3) Encodes a member of the RAV...	0.02	Orthogroups_2024-Update
MA_178646g0010	No alias	(at1g68840 : 271.0) Rav2 is part of a complex that has...	0.04	Orthogroups_2024-Update
PSME_00032471-RA	No alias	(at1g68840 : 300.0) Rav2 is part of a complex that has...	0.03	Orthogroups_2024-Update
Potri.006G208100	No alias	AP2/B3-like transcriptional factor family protein	0.04	Orthogroups_2024-Update
Potri.011G149700	No alias	AP2/B3-like transcriptional factor family protein	0.03	Orthogroups_2024-Update
Sobic.003G265200.1	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.03	Orthogroups_2024-Update
Solyc04g007000	No alias	AP2/B3 transcription factor family protein (AHRD V3.3...	0.03	Orthogroups_2024-Update
Sopen05g005620	No alias	B3 DNA binding domain	0.04	Orthogroups_2024-Update
Sopen10g032690	No alias	B3 DNA binding domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	Predicted GO
BP	GO:0006353	DNA-templated transcription, termination	IEP	Predicted GO
BP	GO:0006595	polyamine metabolic process	IEP	Predicted GO
BP	GO:0006596	polyamine biosynthetic process	IEP	Predicted GO
BP	GO:0006597	spermine biosynthetic process	IEP	Predicted GO
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0008215	spermine metabolic process	IEP	Predicted GO
BP	GO:0008216	spermidine metabolic process	IEP	Predicted GO
BP	GO:0008295	spermidine biosynthetic process	IEP	Predicted GO
BP	GO:0009309	amine biosynthetic process	IEP	Predicted GO
BP	GO:0009719	response to endogenous stimulus	IEP	Predicted GO
BP	GO:0009725	response to hormone	IEP	Predicted GO
BP	GO:0009733	response to auxin	IEP	Predicted GO
BP	GO:0010033	response to organic substance	IEP	Predicted GO
BP	GO:0015994	chlorophyll metabolic process	IEP	Predicted GO
BP	GO:0015995	chlorophyll biosynthetic process	IEP	Predicted GO
BP	GO:0019321	pentose metabolic process	IEP	Predicted GO
BP	GO:0019566	arabinose metabolic process	IEP	Predicted GO
BP	GO:0042221	response to chemical	IEP	Predicted GO
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predicted GO
BP	GO:0042440	pigment metabolic process	IEP	Predicted GO
BP	GO:0046148	pigment biosynthetic process	IEP	Predicted GO
BP	GO:0046373	L-arabinose metabolic process	IEP	Predicted GO
MF	GO:0046406	magnesium protoporphyrin IX methyltransferase activity	IEP	Predicted GO
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEP	Predicted GO
BP	GO:0097164	ammonium ion metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	63	111
IPR003340	B3_DNA-bd	188	288

External Links

No external refs found!

At1g68840

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation