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  5. GRMZM5G846196

GRMZM5G846196


Description : vesicle-associated membrane protein 713


Gene families : OG_42_0000264 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM5G846196
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
80138 No alias vesicle-associated membrane protein 714 0.03 Orthogroups_2024-Update
At4g15780 No alias vesicle-associated membrane protein 724... 0.03 Orthogroups_2024-Update
At5g22360 No alias Vesicle-associated membrane protein 714... 0.03 Orthogroups_2024-Update
Brara.C01000.1 No alias R-type VAMP7-group component of SNARE longin membrane... 0.02 Orthogroups_2024-Update
Brara.D00474.1 No alias R-type VAMP7-group component of SNARE longin membrane... 0.03 Orthogroups_2024-Update
GRMZM2G008919 No alias vesicle-associated membrane protein 726 0.04 Orthogroups_2024-Update
Glyma.15G126200 No alias vesicle-associated membrane protein 726 0.03 Orthogroups_2024-Update
Kfl00515_0100 kfl00515_0100_v1.1 (at2g32670 : 271.0) member of Synaptobrevin -like... 0.01 Orthogroups_2024-Update
Potri.008G019400 No alias vesicle-associated membrane protein 727 0.03 Orthogroups_2024-Update
Potri.008G209100 No alias vesicle-associated membrane protein 724 0.04 Orthogroups_2024-Update
Pp1s219_102V6 No alias vesicle-associated membrane 0.04 Orthogroups_2024-Update
Seita.6G243100.1 No alias R-type VAMP7-group component of SNARE longin membrane... 0.04 Orthogroups_2024-Update
Sobic.002G068300.1 No alias R-type component *(VAMP721/VAMP722) of SNARE cell-plate... 0.02 Orthogroups_2024-Update
Sobic.007G168600.4 No alias R-type VAMP7-group component of SNARE longin membrane... 0.02 Orthogroups_2024-Update
Solyc06g083530 No alias Vesicle-associated membrane protein, putative (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen02g018280 No alias Synaptobrevin 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0007029 endoplasmic reticulum organization IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001388 Synaptobrevin 125 212
IPR010908 Longin_dom 29 109
No external refs found!