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  5. At1g69260

At1g69260


Description : Ninja-family protein AFP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ98]


Gene families : OG_42_0000789 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000789_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g69260
Cluster HCCA clusters: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
A4A49_10751 No alias ninja-family protein afp3 0.03 Orthogroups_2024-Update
A4A49_14878 No alias ninja-family protein afp1 0.04 Orthogroups_2024-Update
Brara.B03380.1 No alias transcriptional co-repressor *(AFP/NINJA) 0.03 Orthogroups_2024-Update
Brara.C02972.1 No alias transcriptional co-repressor *(AFP/NINJA) 0.03 Orthogroups_2024-Update
Seita.2G381600.1 No alias transcriptional co-repressor *(AFP/NINJA) 0.03 Orthogroups_2024-Update
Sobic.001G335400.1 No alias transcriptional co-repressor *(AFP/NINJA) 0.02 Orthogroups_2024-Update
Sopen05g007040 No alias Protein of unknown function (DUF1675) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
BP GO:0006333 chromatin assembly or disassembly IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR032310 NINJA_B 110 223
IPR032308 Jas 272 335
IPR012463 Ninja_motif 41 74
No external refs found!